INFO : AT.py : Setting {'basename': 'x', 'file': 'SEXTANS-A_92177.nf.fits'} for Ingest_AT
INFO : AT.py : Setting 'ppp' = True for CubeStats_AT
INFO : AT.py : Setting 'numsigma' = 4.0 for CubeSum_AT
INFO : AT.py : Setting 'sigma' = 99.0 for CubeSum_AT
INFO : AT.py : Setting 'numsigma' = 4.0 for SFind2D_AT
INFO : Admit.py : ADMIT run() called [flowcount 1]
INFO :
INFO :
INFO : Executing Ingest_AT - '' (V1.2.13)
INFO :
INFO :
INFO : Run using the following settings:
INFO : box : []
INFO : file : SEXTANS-A_92177.nf.fits
INFO : smooth : []
INFO : basename : x
INFO : mask : True
INFO : pb :
INFO : edge : []
INFO : restfreq : -1.0
INFO : vlsr : -999999.9
INFO : usepb : True
INFO :
TIMING : Ingest ADMIT [ 2.32199000e+00 1.64394505e+09]
TIMING : Ingest BEGIN [ 0. 0.]
INFO : Ingest_AT.py : OBJECT: SEXTANS-A SHAPE: [ 55 55 689]
INFO : Ingest_AT.py : basename=x
INFO : utils.py : OSTYPE: linux
TIMING : Ingest start [ 1.70578000e-01 1.77485943e-01 1.41056250e+03 2.18554688e+02]
TIMING : Ingest importfits [ 1.09669000e-01 1.55076027e-01 1.41057812e+03 2.19859375e+02]
WARNING : Ingest_AT.py : Adding dummy STOKES-I axis
TIMING : Ingest adddegaxes [ 5.47430000e-02 7.56330490e-02 1.41310938e+03 2.22980469e+02]
TIMING : Ingest summary-0 [ 1.44180000e-02 1.44751072e-02 1.41310938e+03 2.22980469e+02]
TIMING : Ingest mask [ 2.76170000e-02 3.72369289e-02 1.41310938e+03 2.23324219e+02]
TIMING : Ingest summary-1 [ 1.34920000e-02 1.71790123e-02 1.41310938e+03 2.23324219e+02]
TIMING : Ingest statistics [ 4.46770000e-02 4.47919369e-02 1.41113281e+03 2.22570312e+02]
INFO : Ingest_AT.py : COMMONBEAM[3] {'major': {'value': 12.6500004, 'unit': 'arcsec'}, 'pa': {'value': 0.0, 'unit': 'deg'}, 'minor': {'value': 12.6500004, 'unit': 'arcsec'}}
INFO : Ingest_AT.py : BASICS: [shape] npts min max: [ 55 55 689 1] 1432431 -0.385837 0.394241
INFO : Ingest_AT.py : S/N (all data): 5.146262
INFO : Ingest_AT.py : GOOD PIXELS: 1432431/2084225 (68.727273% good or 31.272727% bad)
WARNING : Ingest_AT.py : MASKS: ['mask0']
REGRESSION : CUBE: -0.385837 0.394241 0.0766073 55 55 689 31.272727
INFO : Ingest_AT.py : TELESCOPE: LMT
INFO : Ingest_AT.py : OBJECT: SEXTANS-A
INFO : Ingest_AT.py : REFFREQTYPE: LSRK
INFO : Ingest_AT.py : RA Axis 1: 152.783800 -5.500001 27.000000
INFO : Ingest_AT.py : DEC Axis 2: -4.704639 5.500001 27.000000
INFO : Ingest_AT.py : VLSRv = 0.000000 (from source catalog)
INFO : Ingest_AT.py : VLSRz = 0.000000 +/- 0.000000 1 values: [ 0.]
INFO : Ingest_AT.py : Freq Orig Axis 3: 115.016 0.000390625 0
INFO : Ingest_AT.py : Cube Orig Axis 3: type=Frequency velocity increment=-1.015921 km/s @ fc=115.149890 fw=0.269141 GHz
INFO : Ingest_AT.py : RESTFREQ: 115.271 115.271 -1
INFO : Ingest_AT.py : VLSRc= 315.507976 VLSRf= 0.000000 VLSRv= 0.000000 VLSRz= 0.000000 WIDTH= -699.969569
INFO : Ingest_AT.py : VLSR = 315.507976 errs = 0.000000 0.000000 0.000000 width = -1.015921
TIMING : Ingest done [ 5.71171000e-01 5.86194038e-01 1.41469531e+03 2.26351562e+02]
TIMING : Ingest END [ 1.018384 1.12012506]
INFO : AT.py : BDP_OUT[0] = SpwCube_BDP x.im
INFO :
INFO :
INFO : Executing CubeStats_AT - '' (V1.2.3)
INFO :
INFO :
INFO : Run using the following settings:
INFO : ppp : True
INFO : psample : -1
INFO : robust : []
INFO : maxvrms : 2.0
INFO :
TIMING : CubeStats ADMIT [ 3.40070000e+00 1.64394505e+09]
TIMING : CubeStats BEGIN [ 0. 0.]
TIMING : CubeStats imval [ 5.27660000e-02 5.29890060e-02 1.41394531e+03 2.25921875e+02]
TIMING : CubeStats start [ 1.23030000e-02 1.23450756e-02 1.41394531e+03 2.25921875e+02]
TIMING : CubeStats imstat0 [ 1.20491000e-01 1.20894909e-01 1.43180469e+03 2.44351562e+02]
TIMING : CubeStats imstat1 [ 1.37771000e-01 1.38224125e-01 1.43451953e+03 2.46902344e+02]
INFO : CubeStats_AT.py : sigma varies from 0.069245 to 0.084276; 689/689 channels ok
INFO : CubeStats_AT.py : Computing MaxPos for PeakPointPlot
TIMING : CubeStats ppp [ 7.48447000e-01 7.51076937e-01 1.43451953e+03 2.47070312e+02]
INFO : CubeStats_AT.py : CubeMax: 0.394241 @ [ 54 35 430 0]
INFO : CubeStats_AT.py : CubeMin: -0.385837 @ [ 38 37 452 0]
INFO : CubeStats_AT.py : CubeRMS: 0.076471
INFO : CubeStats_AT.py : RMS Sanity check 1.001779
REGRESSION : CST: 0.076471 1.001779
INFO : CubeStats_AT.py : mean,rms,S/N=-0.000087 0.076471 5.155416
INFO : CubeStats_AT.py : RMS BAD VARIATION RATIO: 1.128947 1.130177
TIMING : CubeStats plotting [ 2.294078 2.46560597 1458.42578125 269.375 ]
TIMING : CubeStats done [ 1.35630000e-02 1.36029720e-02 1.45842578e+03 2.69375000e+02]
TIMING : CubeStats summary [ 1.22740000e-02 1.23200417e-02 1.45842578e+03 2.69375000e+02]
TIMING : CubeStats END [ 3.403939 3.57934403]
INFO : AT.py : BDP_OUT[0] = CubeStats_BDP x.cst
INFO :
INFO :
INFO : Executing CubeSum_AT - '' (V1.2.2)
INFO :
INFO :
INFO : Run using the following settings:
INFO : linesum : True
INFO : numsigma : 4.0
INFO : zoom : 1
INFO : pad : 5
INFO : sigma : 99.0
INFO :
TIMING : CubeSum ADMIT [ 6.86476900e+00 1.64394505e+09]
TIMING : CubeSum BEGIN [ 0. 0.]
INFO : CubeSum_AT.py : Using constant sigma = 0.076471
TIMING : CubeSum start [ 5.20410000e-02 5.21848202e-02 1.45842578e+03 2.69375000e+02]
TIMING : CubeSum immoments [ 5.94290000e-02 1.02954149e-01 1.45842578e+03 2.69820312e+02]
TIMING : CubeSum statistics [ 2.06390000e-02 2.07378864e-02 1.45842578e+03 2.69820312e+02]
INFO : CubeSum_AT.py : Total flux: -17.436072 (sum=-0.576399)
REGRESSION : CSM: [-17.436072072342238, -0.57639890909194946]
TIMING : CubeSum implot [ 1.40625000e-01 6.06704807e+00 1.53042969e+03 2.69855469e+02]
TIMING : CubeSum getdata [ 2.10950000e-02 2.11839676e-02 1.53042969e+03 2.69855469e+02]
TIMING : CubeSum done [ 2.32006000e-01 2.50909090e-01 1.53042969e+03 2.69921875e+02]
TIMING : CubeSum END [ 0.539322 6.52855396]
INFO : AT.py : BDP_OUT[0] = Moment_BDP x.csm
INFO :
INFO :
INFO : Executing SFind2D_AT - 'csm' (V1.2.2)
INFO :
INFO :
INFO : Run using the following settings:
INFO : nmax : 30
INFO : numsigma : 4.0
INFO : snmax : 35.0
INFO : region :
INFO : zoom : 1
INFO : robust : ['hin', 1.5]
INFO : sigma : -1.0
INFO :
TIMING : SFind2D ADMIT [ 7.46410700e+00 1.64394506e+09]
TIMING : SFind2D BEGIN [ 0. 0.]
TIMING : SFind2D start [ 3.35030000e-02 3.36568356e-02 1.53042969e+03 2.69921875e+02]
TIMING : SFind2D imstat [ 4.06530000e-02 4.09460068e-02 1.53042969e+03 2.69921875e+02]
INFO : AT.py : Setting 'sigma' = 0.329799380703 for SFind2D_AT
INFO : SFind2D_AT.py : sigma, dmin, dmax, snmax, cutoff 0.329799 -0.391979 0.400518 35 3.29373
WARNING : SFind2D_AT.py : Temporarely patching your K.km/s units to Jy/beam for ia.findsources()
TIMING : SFind2D findsources [ 9.01360000e-02 9.98880863e-02 1.53042969e+03 2.69921875e+02]
REGRESSION : CONTFLUX: 0 0
INFO : SFind2D_AT.py : Fitted Gaussian size; NOT deconvolved source size.
INFO : SFind2D_AT.py : Restoring Beam: Major axis: 12.7 arcsec , Minor axis: 12.7 arcsec , PA: 0.0 deg
TIMING : SFind2D done [ 2.59271000e-01 3.08544874e-01 1.53042969e+03 2.70378906e+02]
TIMING : SFind2D END [ 0.437009 0.49652195]
INFO : AT.py : BDP_OUT[0] = SourceList_BDP x-csm.sl
TIMING : ADMITrun END [ 5.993481 12.38391089]
INFO : Admit.py : ADMIT run() finished [flowcount 1] [cpu 5.99348 12.3839 ]
INFO : AT.py : Setting 'csub' = [0, 0] for LineSegment_AT
INFO : Admit.py : ADMIT run() called [flowcount 1]
INFO :
INFO :
INFO : Executing CubeSpectrum_AT - '' (V1.2.5)
INFO :
INFO :
INFO : Run using the following settings:
INFO : xaxis :
INFO : sources : [0]
INFO : pos : []
INFO :
TIMING : CubeSpectrum ADMIT [ 8.11441000e+00 1.64394506e+09]
TIMING : CubeSpectrum BEGIN [ 0. 0.]
INFO : CubeSpectrum_AT.py : CubeStats::maxpos,val=[54, 35, 430],0.394241
TIMING : CubeSpectrum CubeStats-pos [ 4.89150000e-02 4.90410328e-02 1.53042969e+03 2.70378906e+02]
INFO : CubeSpectrum_AT.py : CubeSum::maxpos,val=[54, 35],0.400518
TIMING : CubeSpectrum Moment-pos [ 4.23310000e-02 4.24559116e-02 1.53042969e+03 2.70378906e+02]
TIMING : CubeSpectrum open [ 1.21890000e-02 1.22709274e-02 1.53042969e+03 2.70378906e+02]
TIMING : CubeSpectrum imval [ 4.38490000e-02 4.40480709e-02 1.53042969e+03 2.71035156e+02]
TIMING : CubeSpectrum imhead [ 4.12870000e-02 4.14469242e-02 1.53042969e+03 2.71035156e+02]
REGRESSION : CSP: [0.39424145221710205]
INFO : CubeSpectrum_AT.py : Writing 1 testCubeSpectrum tables
TIMING : CubeSpectrum done [ 2.70961000e-01 2.89096117e-01 1.53042969e+03 2.71218750e+02]
TIMING : CubeSpectrum summary [ 1.23700000e-02 1.24011040e-02 1.53042969e+03 2.71218750e+02]
TIMING : CubeSpectrum END [ 0.483949 0.50284004]
INFO : AT.py : BDP_OUT[0] = CubeSpectrum_BDP x.csp
INFO :
INFO :
INFO : Executing LineSegment_AT - '' (V1.2.3)
INFO :
INFO :
INFO : Run using the following settings:
INFO : numsigma : 5.0
INFO : minchan : 4
INFO : edgechannels : 0
INFO : smooth : []
INFO : recalcnoise : False
INFO : maxgap : 3
INFO : csub : [0, 0]
INFO : iterate : True
INFO : segment : ADMIT
INFO :
TIMING : LineSegment ADMIT [ 8.65831500e+00 1.64394506e+09]
TIMING : LineSegment BEGIN [ 0. 0.]
TIMING : LineSegment start [ 2.44760000e-02 2.45389938e-02 1.53042969e+03 2.71218750e+02]
INFO : LineSegment_AT.py : Attempting Continuum Subtraction for Input Spectra
INFO : LineSegment_AT.py : Attempting Continuum Subtraction for Input CubeStats Spectra
TIMING : LineSegment getspectrum [ 7.806695 7.83232117 1530.4296875 271.70703125]
INFO : LineSegment_AT.py : Detecting segments in CubeSpectrum based data
INFO : LineSegment_AT.py : Detecting segments in CubeStats based data
TIMING : LineSegment segment finder [ 2.050147 2.05600381 1530.4296875 271.70703125]
INFO : LineSegment_AT.py : Segment Coverage 0 / 689 = 0
REGRESSION : LINESEG: []
TIMING : LineSegment done [ 1.52789300e+00 1.61257815e+00 1.55511328e+03 2.96339844e+02]
TIMING : LineSegment END [ 11.421566 11.53783202]
INFO : AT.py : BDP_OUT[0] = LineSegment_BDP x.lseg
TIMING : ADMITrun END [ 18.151468 24.72404194]
INFO : Admit.py : ADMIT run() finished [flowcount 1] [cpu 18.1515 24.724 ]
INFO : Admit.py : ADMIT run() called [flowcount 1]
TIMING : ADMITrun END [ 18.249202 24.87756991]
INFO : Admit.py : ADMIT run() finished [flowcount 1] [cpu 18.2492 24.8776 ]
INFO : AT.py : Setting 'csub' = [0, 0] for LineID_AT
INFO : AT.py : Setting 'references' = etc/tier1_lines.list for LineID_AT
INFO : Admit.py : ADMIT run() called [flowcount 1]
INFO :
INFO :
INFO : Executing LineID_AT - '' (V1.2.7)
INFO :
INFO :
INFO : Run using the following settings:
INFO : numsigma : 5.0
INFO : force : []
INFO : tier1width : 0.0
INFO : online : False
INFO : recomblevel : shallow
INFO : references : etc/tier1_lines.list
INFO : csub : [0, 0]
INFO : identifylines : True
INFO : iterate : True
INFO : segment : ADMIT
INFO : allowexotics : False
INFO : minchan : 4
INFO : pattern : AUTO
INFO : edgechannels : 0
INFO : smooth : []
INFO : recalcnoise : False
INFO : vlsr : -999999.99
INFO : maxgap : 3
INFO : reject : []
INFO : method : {'PeakFinder': {'thresh': 0.0}}
INFO : mode : ONE
INFO :
TIMING : LineID ADMIT [ 2.03927280e+01 1.64394507e+09]
TIMING : LineID BEGIN [ 0. 0.]
INFO : LineID_AT.py : Set vlsr = 315.51 for line identification.
INFO : LineID_AT.py : Identifylines = True
INFO : LineID_AT.py : Using vlsr = 315.508
INFO : LineID_AT.py : Attempting Continuum Subtraction for Input Spectra
TIMING : LineID getspectrum-cubespecs [ 2.545506 2.55183887 1555.11328125 296.3984375 ]
INFO : LineID_AT.py : Attempting Continuum Subtraction for Input CubeStats Spectra
TIMING : LineID getspectrum-cubestats [ 5.35477 5.37136912 1555.11328125 296.3984375 ]
TIMING : LineID segment finder [ 1.34810000e-02 1.35450363e-02 1.55511328e+03 2.96398438e+02]
INFO : LineID_AT.py : Detecting segments in CubeSpectrum based data
INFO : LineID_AT.py : Detecting segments in CubeStats based data
INFO : LineID_AT.py : Searching for spectral peaks with method: PeakFinder
WARNING : LineID_AT.py : No lines detected by LineID.
TIMING : LineID nolines [ 10.325461 10.47705388 1610.671875 352.08203125]
TIMING : LineID END [ 18.253304 18.42793489]
INFO : AT.py : BDP_OUT[0] = LineList_BDP x.ll
TIMING : ADMITrun END [ 36.782945 43.64372802]
INFO : Admit.py : ADMIT run() finished [flowcount 1] [cpu 36.7829 43.6437 ]
INFO : Admit.py : ADMIT run() called [flowcount 1]
INFO :
INFO :
INFO : Executing LineCube_AT - '' (V1.2.2)
INFO :
INFO :
INFO : Run using the following settings:
INFO : equalize : False
INFO : pad : 5
INFO : fpad : -1.0
INFO :
TIMING : LineCube ADMIT [ 3.88798560e+01 1.64394509e+09]
TIMING : LineCube BEGIN [ 0. 0.]
INFO : LineCube_AT.py : No lines found in input LineList_BDP, exiting.
TIMING : ADMITrun END [ 36.957132 43.88177586]
INFO : Admit.py : ADMIT run() finished [flowcount 1] [cpu 36.9571 43.8818 ]
INFO : AT.py : Setting 'moments' = [0, 1, 2] for Moment_AT
INFO : AT.py : Setting 'mom0clip' = 2.0 for Moment_AT
INFO : Admit.py : ADMIT run() called [flowcount 1]
INFO :
INFO :
INFO : Executing Moment_AT - '' (V1.2.2)
INFO :
INFO :
INFO : Run using the following settings:
INFO : numsigma : [2.0]
INFO : moments : [0, 1, 2]
INFO : mom0clip : 2.0
INFO : zoom : 1
INFO : chans :
INFO : sigma : -1.0
INFO :
TIMING : Moment ADMIT [ 3.91036220e+01 1.64394509e+09]
TIMING : Moment BEGIN [ 0. 0.]
TIMING : Moment open [ 4.80040000e-02 4.81398106e-02 1.61067188e+03 3.52082031e+02]
TIMING : Moment immoments-all [ 8.58230000e-02 3.72411013e-01 1.61067188e+03 3.52082031e+02]
TIMING : Moment mom0clip [ 6.83900000e-02 1.04006052e-01 1.61067188e+03 3.52234375e+02]
TIMING : Moment implot [ 9.65170000e-02 3.45854998e-01 1.61735547e+03 3.58792969e+02]
TIMING : Moment getdata [ 2.03980000e-02 2.04799175e-02 1.61735547e+03 3.58792969e+02]
TIMING : Moment ren+mask_0 [ 3.23916000e-01 3.28974009e-01 1.61833594e+03 3.59773438e+02]
TIMING : Moment makemask [ 1.48661000e-01 3.99378061e-01 1.61833594e+03 3.59835938e+02]
TIMING : Moment implot [ 7.78230000e-02 3.39545012e-01 1.61833594e+03 3.60683594e+02]
TIMING : Moment getdata [ 2.01550000e-02 2.02260017e-02 1.61833594e+03 3.60683594e+02]
TIMING : Moment ren+mask_1 [ 2.51976000e-01 2.56534100e-01 1.61683594e+03 3.59183594e+02]
TIMING : Moment makemask [ 1.48329000e-01 4.60710049e-01 1.61683594e+03 3.59183594e+02]
TIMING : Moment implot [ 7.67460000e-02 3.24521780e-01 1.61683594e+03 3.59183594e+02]
TIMING : Moment getdata [ 1.99940000e-02 2.00572014e-02 1.61683594e+03 3.59183594e+02]
TIMING : Moment ren+mask_2 [ 2.44467000e-01 2.49625921e-01 1.61583594e+03 3.58183594e+02]
REGRESSION : MOM0FLUX: SPW_FULL -30.5372 92.7874 0.0330578 299.868 299.868 85.2858
TIMING : Moment mom0flux [ 5.05190000e-02 5.06689548e-02 1.61583594e+03 3.58183594e+02]
TIMING : Moment flux-spectrum [ 3.84500000e-01 3.90156984e-01 1.61483594e+03 3.57183594e+02]
TIMING : Moment done [ 1.46590000e-02 1.46989822e-02 1.61483594e+03 3.57183594e+02]
TIMING : Moment END [ 2.093043 3.75820684]
INFO : AT.py : BDP_OUT[0] = Moment_BDP x.mom_0
INFO : AT.py : BDP_OUT[1] = Moment_BDP x.mom_1
INFO : AT.py : BDP_OUT[2] = Moment_BDP x.mom_2